Utility#

SingleCell.skip_qc

Skips QC, but allows the dataset to be used by downstream functions that require QCed data.

SingleCell.peek_obs

Print a row of obs (the first row, by default) with each column on its own line.

SingleCell.peek_var

Print a row of var (the first row, by default) with each column on its own line.

SingleCell.pipe

Apply a function to a SingleCell dataset.

SingleCell.pipe_X

Apply a function to a SingleCell dataset's X.

SingleCell.pipe_obs

Apply a function to a SingleCell dataset's obs.

SingleCell.pipe_var

Apply a function to a SingleCell dataset's var.

SingleCell.pipe_obsm

Apply a function to a SingleCell dataset's obsm.

SingleCell.pipe_obsm_key

Apply a function to a specific key in a SingleCell dataset's obsm.

SingleCell.pipe_varm

Apply a function to a SingleCell dataset's varm.

SingleCell.pipe_varm_key

Apply a function to a specific key in a SingleCell dataset's varm.

SingleCell.pipe_obsp

Apply a function to a SingleCell dataset's obsp.

SingleCell.pipe_obsp_key

Apply a function to a specific key in a SingleCell dataset's obsp.

SingleCell.pipe_varp

Apply a function to a SingleCell dataset's varp.

SingleCell.pipe_varp_key

Apply a function to a specific key in a SingleCell dataset's varp.

SingleCell.pipe_uns

Apply a function to a SingleCell dataset's uns.

SingleCell.pipe_uns_key

Apply a function to a specific key in a SingleCell dataset's uns.