gene#

Pseudobulk.gene(cell_type, gene, /)[source]#

Get the column of X[cell_type] corresponding to a single gene, based on the gene’s name in var_names.

Parameters:
  • cell_type: str

    the cell type to retrieve the row of X from

  • gene: str

    the name of the gene in var_names

Returns:

The corresponding column of X[cell_type], as a dense 1D NumPy array with zeros included.

Return type:

ndarray