get_num_hits

DE.get_num_hits(*, significance_column='FDR', threshold=0.05)

Get the number of differentially expressed genes in each cell type.

Parameters:

• significance_column: str

  the name of a numeric column of self.table to determine significance from

• threshold: int | float

  the significance threshold corresponding to significance_column

Returns:

‘cell_type’ and ‘num_hits’.

Return type:

A DataFrame with one row per cell type and two columns